Home > Recipes > Amazing 14 Gluten Free Almond Flour Chocolate Chip Cookies

Amazing 14 Gluten Free Almond Flour Chocolate Chip Cookies

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Mark Williams

January 3, 2026

A close-up of several soft, thick Gluten Free Almond Flour Chocolate Chip Cookies dotted with melted chocolate chips.

I’m Mark, and if you’re anything like me, finding a truly knockout gluten free cookie that doesn’t taste like cardboard or crumble into dust the second you touch it feels like discovering buried treasure. Well, friends, I’ve struck gold! I’ll never forget the first time I baked these Gluten Free Almond Flour Chocolate Chip Cookies. It was a rainy Saturday afternoon, and I was craving something sweet but didn’t want to derail my keto lifestyle. After some intense experimentation (and a few failed crumbly attempts, oops!), I discovered the perfect balance of almond flour and just the right amount of richness. The aroma of melting chocolate and nutty goodness immediately filled my kitchen!

Close-up of several freshly baked Gluten Free Almond Flour Chocolate Chip Cookies with melted chocolate chunks on parchment paper.

When I took that first warm bite, I was reminded that healthy choices can absolutely be indulgent. These cookies quickly became a family favorite around here, proving that dessert can be both incredibly satisfying and mindful of dietary needs. You’re going to love how simple they are, and how they fit perfectly into a low-carb life!

Why You Will Love These Gluten Free Almond Flour Chocolate Chip Cookies

Honestly, getting a cookie right when you ditch the wheat flour and the refined sugar is tougher than it looks! But trust me, these cookies are different. They are everything a good chocolate chip cookie should be—rich, gooey, and satisfying—while still checking all the boxes for mindful eating. You won’t believe they fit your lifestyle!

  • Flavor that punches above its weight class—pure indulgence!
  • Super easy mix time—less fussing, more eating.
  • Perfect structure that makes them ideal for sharing (if you can manage to keep them that long!).

Perfect Texture: Chewy Gluten Free Treats

The number one complaint about gluten free cookies is that they are either cracker-crisp or chalky. Not these! Because we are using nutrient-dense almond flour, we skip the gluten and get something wonderfully dense and unbelievably soft. They settle into the perfect, satisfying chew. They really are the definition of chewy gluten free treats.

Better for You Baking Approach

When you’re baking with almond flour, you instantly elevate the cookie game. It’s a simple switch that makes these true almond flour desserts. They offer healthy fats and protein compared to their traditional counterparts. You get that comforting, warm flavor without compromising your goals. This is what I call better for you baking!

Essential Ingredients for Gluten Free Almond Flour Chocolate Chip Cookies

Okay, let’s talk about what actually goes into these amazing gluten free cookies! This recipe is simple, which is usually how the best desserts turn out, in my opinion. We aren’t using a ton of specialty flours here, which means you probably have most of this stuff hanging around already. Remember, almond flour is the star, so make sure yours is fresh!

I’ve put together a list of everything you need below. Pay close attention to the notes, especially regarding that beautiful King Arthur almond flour. Trust me, using a high-quality almond base makes a world of difference when you’re aiming for those sweet, chewy gluten free treats. If you’re stocking your pantry for low-carb baking in general, you might want to check out my guide on essential keto pantry items!

Here’s what you need for about 14 perfect cookies:

Cookie Ingredients

  • 1/4 cup Brown Sugar (Light or dark—I lean toward dark for more flavor!)
  • 1/2 teaspoon Baking Soda
  • 1/4 teaspoon Salt
  • 2 tablespoons Butter (It absolutely must be at room temperature so it creams nicely!)
  • 2 teaspoons Vanilla Extract
  • 1 large Egg
  • 2 cups Almond Flour (I highly recommend using the King Arthur brand for the best results in these almond flour desserts)
  • 1/2 cup Chocolate Chips

Ingredient Notes and Substitutions

The success of these cookies hinges on the almond flour. It has natural fats that substitute beautifully for what gluten usually provides, giving us that rich texture in our better for you baking. Because the fat content is already high, you can’t just swap it out for coconut flour or some other flour you might have on hand. Coconut flour soaks up way too much moisture, and regular all-purpose flour (if you were making gluten cookies) just won’t give you the same tender crumb structure.

Also, make sure your butter isn’t melted, even if you’re in a rush. If it’s too soft, everything gets greasy instead of fluffy when you mix it. The room temperature rule is super important for trapping air!

Equipment Needed for Perfect Gluten Free Almond Flour Chocolate Chip Cookies

Don’t worry—you don’t need a fancy stand mixer or any complicated gadgets for these gluten free cookies! This recipe is designed to be straightforward, so pull out your basic mixing gear. Getting organized keeps the energy up, and trust me, you want that energy focused purely on mixing the dough!

Here are the easy tools I always grab when I’m whipping up a batch of these almond flour desserts:

  • Baking Sheet: You’ll need at least one standard sheet pan ready to go.
  • Parchment Paper: Non-negotiable! This prevents sticking, which is key when we shape these cookies small.
  • Mixing Bowl: Just one medium to large bowl should do the trick for combining everything.
  • Cookie Scoop: Okay, this isn’t *strictly* required, but I obsessively recommend a cookie scoop. I use one level tablespoon size. It ensures all your chewy gluten free treats bake evenly because they are all the exact same size!

Step-by-Step Instructions to Make Gluten Free Almond Flour Chocolate Chip Cookies

Putting these gluten free cookies together is honestly so fast you might think you missed a step! I bake these when friends drop by unexpectedly because the prep time is nonexistent. These almond flour desserts come together using the reverse creaming method, which is just a fancy way of saying we mix the butter with the sugar and dry stuff before adding the wet ingredients. It keeps the texture spot-on for those chewy gluten free treats.

Make sure your oven is hot and your pans are ready. Check out my guide on making keto comfort food if you need some baking inspiration while these are in the oven! These instructions are based on a time-tested method I found that really ensures great results, similar to what’s found on sites like Allrecipes, but with my own little twist for that perfect result. Grab your scoop, and let’s get baking!

Mixing the Dough for Gluten Free Almond Flour Chocolate Chip Cookies

First things first: Preheat your oven to 350 degrees F. Get a baking sheet lined up with parchment paper—I swear by it! Now, into your mixing bowl, you’ll combine the brown sugar, baking soda, and salt with your room-temperature butter. Beat these together until they look nice and smooth. Don’t overdo it here, but make sure everything is incorporated.

Next, beat in your vanilla extract and that big egg. Once that’s blended, stream in your glorious almond flour. Mix it until everything is just combined. This is where you stop and scrape down the bottom and sides of the bowl—you don’t want any unmixed bits hiding! After scraping, mix it again for a solid minute at medium speed. That little bit of extra mixing at the end makes a HUGE difference for how fluffy these gluten free almond flour chocolate chip cookies turn out.

Finally, fold in those chocolate chips. Don’t even bother using the mixer for this part; you risk chopping up the chips! Just use a spatula and stir them in gently until they are evenly distributed.

Baking and Cooling Your Gluten Free Almond Flour Chocolate Chip Cookies

Time to scoop! Use one level tablespoon—no eyeballing allowed if you want evenly baked, chewy gluten free treats. Drop them gently onto your prepared baking sheet. You need to slightly flatten each one to about 3/8-inch thick—they won’t spread a ton on their own, so you have to help them out a little.

Pop the tray into that 350-degree oven and bake them for about 9 to 12 minutes. You are looking for golden brown edges. The minute they look done, pull them out! This is the trick for better for you baking—they are better slightly underdone than crisp! Don’t rush the cooling part! Leave them right there on the hot pan for exactly two minutes. That short time lets them set up enough so they don’t fall apart. After those two minutes, carefully move them to a cooling rack to finish cooling completely.

A close-up of several soft, thick Gluten Free Almond Flour Chocolate Chip Cookies cooling on a white paper towel.

Tips for Success with Gluten Free Almond Flour Chocolate Chip Cookies

I’ve learned a few things over the years making these almond flour desserts—mostly through trial and error, which is the chef’s true education, right? If you follow the steps above, you’ll be golden, but I want to give you the inside scoop on avoiding the common pitfalls so you get those perfect, melt-in-your-mouth chewy gluten free treats every single time.

The biggest thing to remember with any gluten free cookies recipe is that the dough handles differently than regular flour dough. Don’t panic if it seems a little softer or heavier than what you’re expecting; that’s the natural state of the almond, and it’s a good thing!

Achieving Perfect Edges and Shape

Remember how I told you to flatten the dough balls slightly before baking? Listen, that step is crucial. Almond flour doesn’t produce the spread that wheat flour does when the butter melts. If you leave the dough in a tall mound, you’ll end up with little domes, not classic cookies. Gentle flattening (about 3/8 inch) ensures they bake evenly and those edges get just a tiny bit crisp while the center stays soft.

Close-up of several freshly baked Gluten Free Almond Flour Chocolate Chip Cookies loaded with melted chocolate chips.

Also, when scooping, be generous but consistent. If you use a level scoop, you ensure that every cookie hits the oven at the same moment and finishes baking at the same moment. Consistency is the silent hero of better for you baking!

Measuring Your Almond Flour Right

This is probably where most people go wrong, even in recipes that aren’t gluten-free. Do *not* scoop your measuring cup directly into the almond flour bag. That compacts it way too much, and you end up adding way too much flour, leading to dry, crumbly cookies. Nobody wants that! For these gluten free almond flour chocolate chip cookies, you need to lightly spoon the flour into your dry measuring cup and then level it off with a knife.

If you really want to get professional about it, you can check out my thoughts on baking best practices over on my author page. Honestly, getting the flour measurement right is half the battle for perfect almond flour desserts!

Handling the Dough Temperature

If your dough feels super greasy when you mix it, your butter was likely too warm. If it feels stiff and won’t mix well, the butter was too cold or you’ve let the dough sit out too long once combined. The ideal time to scoop and bake is right after you mix in the chocolate chips, while the dough is still cooperative. If your kitchen is super warm, or you want them thicker, you can chill the dough for 15 minutes before scooping. A little chill never hurt a cookie, and it can help maintain that gooey center upon baking!

Storage and Reheating Instructions for Your Almond Flour Desserts

The real test of a great cookie? How good it is tomorrow! I’m happy to report that these gluten free cookies hold up incredibly well, which is another reason they are perfect for meal prep or having on hand when that craving hits. Since we skipped traditional flour and used nutrient-rich almond flour, these almond flour desserts actually stay softer longer, provided you store them right!

Keeping them fresh is easy, but you need to be mindful of moisture. You don’t want humidity turning your perfect cookies soggy! I treat these just like I would any delicate batch of chewy gluten free treats.

Keeping them Fresh at Room Temperature

If you plan on eating them within three or four days, just keep them on the counter. You have to use an airtight container, though—no leaving them hanging out on a plate covered loosely with plastic wrap! I prefer stacking them with small pieces of parchment paper cut to size between the layers. This stops them from sticking together into one giant, delicious cookie blob. This works great at room temperature!

Freezing Your Almond Flour Desserts for Later

If you’re a planner like me, freezing is your best friend. These gluten free almond flour chocolate chip cookies freeze like a dream! Make sure they are completely cooled—and I mean stone cold—before you wrap them up, otherwise you’re just freezing condensation, and nobody wants an icy cookie layer.

Wrap the cooled batch tightly in plastic wrap first, then pop the whole bundle into a heavy-duty freezer bag. You can keep them frozen for up to three months. When you’re ready to eat them, let them thaw on the counter for about an hour. They come out tasting almost freshly baked. If you want a warm center, pop the thawed cookie into the microwave for just 8 to 10 seconds! They are amazing that way. For even more make-ahead insights, take a peek at my foolproof chocolate mousse recipe guide!

A Quick Note on Reheating Cookies

Like I mentioned above, a quick zap in the microwave can bring back that just-baked gooeyness, especially for the chocolate chips. But if you want to restore some of that fresh crisp on the edges (if they happened to soften a bit), pop them on a small baking sheet at 325 degrees F for about three minutes. They’ll heat through nicely, and you get that lovely little crisp edge back. It’s the small things that make better for you baking feel totally luxurious!

Variations on Gluten Free Cookies

While I absolutely insist that this recipe for Gluten Free Almond Flour Chocolate Chip Cookies is perfect as written—seriously, don’t mess with the fundamentals here!—I know you bakers love to tinker. And that’s great! Once you’ve mastered the baseline, we can play around a little bit to keep things exciting on your low-carb baking adventures. These little tweaks are easy and keep us firmly in the world of better for you baking.

Think of the base ingredients as your solid, reliable foundation. Everything that goes in after the butter and sugar is creamed can be toyed with safely. It’s all about adding interest and maximizing flavor without accidentally turning your lovely dough into a crumbly mess!

Swap Out the Chocolate Chips

This is the easiest change, and it makes a huge impact! If you’re not a fan of standard semi-sweet, switch them up! I love using chunks of dark chocolate, especially those 85% or higher cacao bars. They melt beautifully and give the cookies a deep, sophisticated bitterness that cuts through the natural sweetness of the almond flour. You still get that satisfying chocolate punch!

For a totally different vibe, try white chocolate chips, but throw in about 1/4 cup of finely chopped pecans or walnuts with them. That combination is divine. You’ll end up with a completely new type of gluten free cookies!

Add Some Zest or Spice

Extracts are the cheapest way to transform any cookie, and these are no exception. If you want to brighten up the flavor profile and make them feel a bit more summery, try adding just 1/2 teaspoon of lemon or orange zest when you add the vanilla extract. It wakes everything up!

On the flip side, if you are craving fall vibes year-round, add just a tiny pinch of cinnamon or nutmeg—maybe 1/8 teaspoon of each—along with your dry ingredients. It pairs magically with the nutty flavor of the almond flour, making these chewy gluten free treats taste even richer.

Nutty Additions for Crunch

If you need more texture and a little extra healthy fat boost, nuts are your friend. Remember, we are aiming for chewy gluten free treats, and chunky nuts can sometimes interfere with that, so the key is chopping them finely. Don’t just toss in whole almonds!

I recommend about 1/3 cup of finely chopped walnuts or pecans. Add them right along with the chocolate chips in the final mixing step. Just pulse them quickly in a food processor until they are broken down into small, uneven pieces, and then fold them in. It adds a great texture contrast to what is already an amazing almond flour dessert!

Close-up of several freshly baked Gluten Free Almond Flour Chocolate Chip Cookies studded with melted chocolate chips on a white plate.

If you’re looking for even more ways to jazz up your low-carb menu, you absolutely have to check out my roundup of 27 keto-friendly desserts that taste like the real deal. Have fun experimenting with these variations!

Frequently Asked Questions About Gluten Free Almond Flour Chocolate Chip Cookies

It’s totally normal to have a few questions crop up when you switch up your baking game, especially when moving into better for you baking territory! Almond flour is fantastic, but it behaves differently than the flour our grandparents used. I’ve gathered the top questions I get asked about these gluten free cookies right here. Hopefully, this clears everything up so you can get back to your mixing bowl!

If you have an urgent question, feel free to reach out via my contact page, but I’ve tried to cover the main sticking points below.

Can I substitute regular all-purpose flour for almond flour in this recipe?

Oh gosh, please don’t! I know tempting it is to just grab whatever is handy, but for this recipe, you really can’t swap in regular all-purpose flour. Almond flour has that high fat content and zero gluten, which is exactly what gives us that gorgeous melt-in-your-mouth texture in our almond flour desserts. If you try to use regular flour, you’re missing the structure provided by the nuts, and what you end up with is more like a pancake or a very flat, tough cookie because the gluten develops instantly.

These cookies rely on the almond flour for almost all of their structure. Stick to the 2 cups of almond flour if you want that perfect result!

Are these cookies truly keto-friendly?

They totally can be! The base ingredients—almond flour, butter, egg, chocolate chips—are already keto-friendly staples. Now, the one spot where you have to watch out is that brown sugar. Traditional brown sugar has a lot of carbs, which busts keto macros in a hurry. In my main recipe, I stick to a tiny amount of brown sugar, but if you are truly strict keto, you should absolutely swap that 1/4 cup of brown sugar for a keto-friendly sweetener like monk fruit blend or erythritol that has brown sugar flavor added.

When you make that swap, you are firmly back in the land of better for you baking, and these treats are perfect for maintaining a low-carb lifestyle!

How do I ensure I get chewy gluten free treats instead of crumbly ones?

This is my favorite secret! The key to avoiding crumbly gluten free almond flour chocolate chip cookies is twofold: proper mixing and slightly under-baking. First, make sure you follow that step where you mix the dough for that extra minute at medium speed *after* adding the flour—that little bit of extra agitation is important for binding. But the real secret sauce is timing in the oven. Bake them until they look *just* set, maybe even slightly puffy in the center, and pull them out right at the 10-minute mark if your oven runs hot. They will look underdone, but give them those critical two minutes on the hot pan after they come out. They continue cooking while cooling, and that gentle finish prevents drying out, locking in that wonderfully soft, chewy gluten free treats texture!

If you have any other recipe dilemmas, you can always drop me a line—I love hearing how your gluten free cookies turned out!

Nutritional Snapshot of Gluten Free Almond Flour Chocolate Chip Cookies

I always like to be super transparent about what we are putting into our bodies, even when it’s a treat! Since these almond flour desserts are so rich in healthy fats from the nuts, the nutrition breakdown looks quite different from your standard flour cookie. It’s great information to have when you’re planning meals or balancing macros.

Keep in mind these numbers are based on the recipe making 14 cookies and using standard ingredients (not necessarily specialized keto sweeteners). These are estimates, of course, but they give you a good idea of what you’re enjoying!

Here’s a quick look at the approximate nutritional breakdown per cookie:

  • Calories: 162
  • Carbohydrates: 11g
  • Protein: 4g
  • Fat: 12g

It’s neat to see the fat content is higher because of the almond flour, which helps keep you feeling satisfied much longer than a white flour cookie would. That’s why these chewy gluten free treats are perfect for that afternoon snack!

Share Your Gluten Free Almond Flour Chocolate Chip Cookies Experience

I absolutely love, love, LOVE seeing your creations! Seriously, when you bake something from my kitchen, it feels like we’re baking together, and I want to see the results of your labors! These gluten free cookies are so much fun to make, and I want to know how they turned out for you and your family.

Did you try adding nuts or changing the chocolate? Did you manage to get those perfect chewy gluten free treats that stay soft for days? Let me know!

Please take a minute to leave a rating right below this section. A simple 5-star rating tells other bakers that this recipe for Gluten Free Almond Flour Chocolate Chip Cookies is the real deal. If you have time, snap a picture of your batch—especially if you added a fun variation—and tag me on social media! I love following along with what you’re cooking up. For those interested in diving deeper into my philosophy, check out my About page.

Happy Baking! I hope you enjoy every perfectly gooey, low-carb bite.

Nutritional Snapshot of Gluten Free Almond Flour Chocolate Chip Cookies

I always like to be super transparent about what we are putting into our bodies, even when it’s a treat! Since these almond flour desserts are so rich in healthy fats from the nuts, the nutrition breakdown looks quite different from your standard flour cookie. It’s great information to have when you’re planning meals or balancing macros.

Keep in mind these numbers are based on the recipe making 14 cookies and using standard ingredients (not necessarily specialized keto sweeteners). These are estimates, of course, but they give you a good idea of what you’re enjoying!

Here’s a quick look at the approximate nutritional breakdown per cookie:

  • Calories: 162
  • Carbohydrates: 11g
  • Protein: 4g
  • Fat: 12g

It’s neat to see the fat content is higher because of the almond flour, which helps keep you feeling satisfied much longer than a white flour cookie would. That’s why these chewy gluten free treats are perfect for that afternoon snack!

Share Your Gluten Free Almond Flour Chocolate Chip Cookies Experience

I absolutely love, love, LOVE seeing your creations! Seriously, when you bake something from my kitchen, it feels like we’re baking together, and I want to see the results of your labors! These gluten free cookies are so much fun to make, and I want to know how they turned out for you and your family.

Did you try adding nuts or changing the chocolate? Did you manage to get those perfect chewy gluten free treats that stay soft for days? Let me know!

Please take a minute to leave a rating right below this section. A simple 5-star rating tells other bakers that this recipe for Gluten Free Almond Flour Chocolate Chip Cookies is the real deal. If you have time, snap a picture of your batch—especially if you added a fun variation—and tag me on social media! I love following along with what you’re cooking up. For those interested in diving deeper into my philosophy, check out my About page.

Happy Baking! I hope you enjoy every perfectly gooey, low-carb bite.

Close-up of several soft, chewy Gluten Free Almond Flour Chocolate Chip Cookies cooling on parchment paper.

Gluten Free Almond Flour Chocolate Chip Cookies

Bake these gluten-free almond flour chocolate chip cookies for a satisfying treat. This recipe is suitable for those following a ketogenic diet or managing gluten sensitivities.
Prep Time 10 minutes
Cook Time 12 minutes
Cooling on Pan 2 minutes
Total Time 24 minutes
Servings: 14 cookies
Course: Dessert
Cuisine: American
Calories: 162

Ingredients
  

Cookie Ingredients
  • 1/4 cup Brown Sugar Light or dark
  • 1/2 teaspoon Baking Soda
  • 1/4 teaspoon Salt
  • 2 tablespoons Butter At room temperature
  • 2 teaspoons Vanilla Extract
  • 1 large Egg
  • 2 cups Almond Flour King Arthur brand recommended
  • 1/2 cup Chocolate Chips

Equipment

  • Baking sheet
  • Parchment paper
  • Mixing bowl
  • Cookie Scoop

Method
 

  1. Preheat your oven to 350 degrees F. Lightly grease a baking sheet, or line it with parchment paper.
  2. Combine the brown sugar, baking soda, salt, and butter. Mix these ingredients until the mixture is smooth.
  3. Mix in the vanilla, egg, and almond flour. Stir to combine everything. Scrape the bottom and sides of the bowl, then mix for 1 minute at medium speed.
  4. Stir in the chocolate chips.
  5. Scoop the dough one level tablespoon at a time onto the prepared baking sheet. A tablespoon cookie scoop works well for this step.
  6. Gently flatten the cookies to about 3/8-inch thick.
  7. Bake the cookies for 9 to 12 minutes, until they look golden brown.
  8. Remove the cookies from the oven. Allow them to cool on the pan for 2 minutes, then carefully transfer them to a rack to cool completely.

Nutrition

Calories: 162kcalCarbohydrates: 11gProtein: 4gFat: 12g

Notes

When I first made these, I found the perfect balance of almond flour and sugar alternatives. These cookies became a family favorite because they are both satisfying and mindful of dietary needs.

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